Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.81■□□□□ 0.12
TCF4P15884 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.81■□□□□ 0.12
TCF4P15884 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TCF4P15884 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.81■□□□□ 0.12
TCF4P15884 AC190387.1-201ENST00000551683 408 ntBASIC15.81■□□□□ 0.12
TCF4P15884 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.81■□□□□ 0.12
TCF4P15884 MIR4745-201ENST00000577608 62 ntBASIC15.81■□□□□ 0.12
TCF4P15884 CLUHP6-201ENST00000580789 941 ntBASIC15.81■□□□□ 0.12
TCF4P15884 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 WFDC1-204ENST00000613603 549 ntBASIC15.81■□□□□ 0.12
TCF4P15884 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCF4P15884 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.81■□□□□ 0.12
TCF4P15884 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
TCF4P15884 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 MSTO2P-201ENST00000314835 1709 ntBASIC15.8■□□□□ 0.12
TCF4P15884 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 AL645937.2-201ENST00000396808 931 ntBASIC15.8■□□□□ 0.12
TCF4P15884 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.8■□□□□ 0.12
TCF4P15884 EIF3FP3-201ENST00000434851 1086 ntBASIC15.8■□□□□ 0.12
TCF4P15884 AC026434.2-201ENST00000506094 1078 ntBASIC15.8■□□□□ 0.12
TCF4P15884 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.8■□□□□ 0.12
TCF4P15884 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.8■□□□□ 0.12
TCF4P15884 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TCF4P15884 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
TCF4P15884 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.8■□□□□ 0.12
TCF4P15884 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.8■□□□□ 0.12
TCF4P15884 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 BX640514.1-201ENST00000583223 1918 ntBASIC15.8■□□□□ 0.12
TCF4P15884 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.8■□□□□ 0.12
TCF4P15884 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.8■□□□□ 0.12
TCF4P15884 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.8■□□□□ 0.12
TCF4P15884 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCF4P15884 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 LINC01230-201ENST00000625222 3017 ntBASIC15.79■□□□□ 0.12
TCF4P15884 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 AL391825.1-201ENST00000457671 1364 ntBASIC15.79■□□□□ 0.12
TCF4P15884 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms