Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC134915.1-201ENST00000426461 574 ntBASIC14.84□□□□□ -0.03
CDH1P12830 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH1P12830 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 ELK1P1-201ENST00000485699 580 ntBASIC14.84□□□□□ -0.03
CDH1P12830 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH1P12830 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH1P12830 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 AC120045.2-201ENST00000567334 178 ntBASIC14.84□□□□□ -0.03
CDH1P12830 SAMD11P1-201ENST00000571429 661 ntBASIC14.84□□□□□ -0.03
CDH1P12830 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.84□□□□□ -0.03
CDH1P12830 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH1P12830 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH1P12830 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
CDH1P12830 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH1P12830 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH1P12830 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.83□□□□□ -0.03
CDH1P12830 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDH1P12830 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH1P12830 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH1P12830 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.04
CDH1P12830 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH1P12830 AL442647.2-201ENST00000429864 857 ntBASIC14.83□□□□□ -0.04
CDH1P12830 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH1P12830 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 AC138761.1-201ENST00000584393 385 ntBASIC14.83□□□□□ -0.04
CDH1P12830 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH1P12830 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH1P12830 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH1P12830 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH1P12830 REXO1L4P-201ENST00000605109 1937 ntBASIC14.83□□□□□ -0.04
CDH1P12830 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH1P12830 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH1P12830 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH1P12830 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH1P12830 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 AC140479.7-201ENST00000636301 2332 ntBASIC14.82□□□□□ -0.04
CDH1P12830 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH1P12830 AL138799.1-201ENST00000448213 1675 ntBASIC14.82□□□□□ -0.04
CDH1P12830 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 C1QBPP1-201ENST00000400117 770 ntBASIC14.82□□□□□ -0.04
CDH1P12830 AC104457.1-201ENST00000401024 814 ntBASIC14.82□□□□□ -0.04
CDH1P12830 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 CRB3P1-201ENST00000449338 276 ntBASIC14.82□□□□□ -0.04
CDH1P12830 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH1P12830 AC004066.1-201ENST00000502488 802 ntBASIC14.82□□□□□ -0.04
CDH1P12830 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.82□□□□□ -0.04
CDH1P12830 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 AL359711.2-201ENST00000563105 872 ntBASIC14.82□□□□□ -0.04
CDH1P12830 CTBP2P3-201ENST00000585629 1255 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms