Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC018892.3-201ENST00000623986 2499 ntBASIC15.32■□□□□ 0.04
THRAP10827 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 AC007326.2-201ENST00000624224 7579 ntBASIC15.32■□□□□ 0.04
THRAP10827 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
THRAP10827 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
THRAP10827 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 AZGP1P1-201ENST00000411909 902 ntBASIC15.31■□□□□ 0.04
THRAP10827 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.31■□□□□ 0.04
THRAP10827 LINC01115-203ENST00000606068 577 ntBASIC15.31■□□□□ 0.04
THRAP10827 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
THRAP10827 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.31■□□□□ 0.04
THRAP10827 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THRAP10827 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.3■□□□□ 0.04
THRAP10827 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.3■□□□□ 0.04
THRAP10827 TTTY23B-201ENST00000442790 549 ntBASIC15.3■□□□□ 0.04
THRAP10827 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.3■□□□□ 0.04
THRAP10827 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.3■□□□□ 0.04
THRAP10827 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.3■□□□□ 0.04
THRAP10827 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.3■□□□□ 0.04
THRAP10827 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
THRAP10827 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
THRAP10827 WFDC1-204ENST00000613603 549 ntBASIC15.3■□□□□ 0.04
THRAP10827 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THRAP10827 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.3■□□□□ 0.04
THRAP10827 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
THRAP10827 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms