Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC21.65■■□□□ 1.06
CHGAP10645 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.65■■□□□ 1.06
CHGAP10645 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.65■■□□□ 1.06
CHGAP10645 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 AC244394.1-201ENST00000435000 1665 ntBASIC21.65■■□□□ 1.06
CHGAP10645 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.65■■□□□ 1.06
CHGAP10645 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGAP10645 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC21.65■■□□□ 1.06
CHGAP10645 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CHGAP10645 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHGAP10645 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.06
CHGAP10645 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHGAP10645 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CHGAP10645 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGAP10645 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CHGAP10645 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHGAP10645 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.64■■□□□ 1.05
CHGAP10645 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 RN7SKP230-201ENST00000365642 335 ntBASIC21.64■■□□□ 1.05
CHGAP10645 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHGAP10645 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
CHGAP10645 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.64■■□□□ 1.05
CHGAP10645 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 RN7SL555P-201ENST00000584742 339 ntBASIC21.64■■□□□ 1.05
CHGAP10645 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.64■■□□□ 1.05
CHGAP10645 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
CHGAP10645 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.64■■□□□ 1.05
CHGAP10645 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGAP10645 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CHGAP10645 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGAP10645 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CHGAP10645 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGAP10645 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGAP10645 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CHGAP10645 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 VDAC1P1-201ENST00000439229 848 ntBASIC21.63■■□□□ 1.05
CHGAP10645 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.63■■□□□ 1.05
CHGAP10645 AL353637.1-201ENST00000451571 732 ntBASIC21.63■■□□□ 1.05
CHGAP10645 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC21.63■■□□□ 1.05
CHGAP10645 HLA-J-204ENST00000495278 958 ntBASIC21.63■■□□□ 1.05
CHGAP10645 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
CHGAP10645 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGAP10645 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGAP10645 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.63■■□□□ 1.05
CHGAP10645 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGAP10645 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGAP10645 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
CHGAP10645 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CHGAP10645 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGAP10645 AL008718.2-201ENST00000609206 1313 ntBASIC21.62■■□□□ 1.05
CHGAP10645 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CHGAP10645 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.62■■□□□ 1.05
CHGAP10645 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.62■■□□□ 1.05
CHGAP10645 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGAP10645 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.62■■□□□ 1.05
CHGAP10645 AC005962.1-201ENST00000584100 773 ntBASIC21.62■■□□□ 1.05
CHGAP10645 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGAP10645 AP003419.4-201ENST00000616071 517 ntBASIC21.62■■□□□ 1.05
CHGAP10645 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms