Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP2P08253 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.21■□□□□ 0.03
MMP2P08253 AC132938.4-201ENST00000623835 848 ntBASIC15.21■□□□□ 0.03
MMP2P08253 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP2P08253 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP2P08253 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP2P08253 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP2P08253 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP2P08253 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MMP2P08253 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP2P08253 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP2P08253 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.03
MMP2P08253 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP2P08253 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP2P08253 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP2P08253 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MMP2P08253 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MMP2P08253 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.21■□□□□ 0.02
MMP2P08253 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP2P08253 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP2P08253 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MMP2P08253 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MMP2P08253 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 RN7SKP230-201ENST00000365642 335 ntBASIC15.2■□□□□ 0.02
MMP2P08253 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP2P08253 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 MESTP3-201ENST00000503460 968 ntBASIC15.2■□□□□ 0.02
MMP2P08253 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP2P08253 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP2P08253 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MMP2P08253 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MMP2P08253 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP2P08253 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP2P08253 AC140479.7-201ENST00000636301 2332 ntBASIC15.2■□□□□ 0.02
MMP2P08253 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 AL138725.1-201ENST00000407347 1314 ntBASIC15.19■□□□□ 0.02
MMP2P08253 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 INE2-201ENST00000630399 1874 ntBASIC15.19■□□□□ 0.02
MMP2P08253 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP2P08253 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP2P08253 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 U91328.1-201ENST00000437528 223 ntBASIC15.19■□□□□ 0.02
MMP2P08253 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 AL590640.2-201ENST00000457038 527 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms