Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
THBS1P07996 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
THBS1P07996 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
THBS1P07996 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
THBS1P07996 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
THBS1P07996 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 AC113367.3-201ENST00000508316 1912 ntBASIC14□□□□□ -0.17
THBS1P07996 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 AL137783.1-201ENST00000623494 1896 ntBASIC13.99□□□□□ -0.17
THBS1P07996 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 SLC7A15P-201ENST00000424028 1363 ntBASIC13.99□□□□□ -0.17
THBS1P07996 AC018665.1-201ENST00000622927 1362 ntBASIC13.99□□□□□ -0.17
THBS1P07996 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 AC134915.1-201ENST00000426461 574 ntBASIC13.99□□□□□ -0.17
THBS1P07996 AL442647.2-201ENST00000429864 857 ntBASIC13.99□□□□□ -0.17
THBS1P07996 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.99□□□□□ -0.17
THBS1P07996 SPTLC1P1-201ENST00000447199 261 ntBASIC13.99□□□□□ -0.17
THBS1P07996 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 AC104596.2-201ENST00000512793 793 ntBASIC13.99□□□□□ -0.17
THBS1P07996 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.99□□□□□ -0.17
THBS1P07996 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.99□□□□□ -0.17
THBS1P07996 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC13.99□□□□□ -0.17
THBS1P07996 AC120045.2-201ENST00000567334 178 ntBASIC13.99□□□□□ -0.17
THBS1P07996 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 OR2I1P-209ENST00000641730 5365 ntBASIC13.99□□□□□ -0.17
THBS1P07996 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
THBS1P07996 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
THBS1P07996 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
THBS1P07996 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 AL139094.1-201ENST00000405549 1188 ntBASIC13.98□□□□□ -0.17
THBS1P07996 PIN1P1-201ENST00000412108 996 ntBASIC13.98□□□□□ -0.17
THBS1P07996 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.98□□□□□ -0.17
THBS1P07996 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms