Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 HLA-V-204ENST00000476601 1289 ntBASIC13.29□□□□□ -0.28
SFTPBP07988 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 AL079307.3-201ENST00000556114 283 ntBASIC13.29□□□□□ -0.28
SFTPBP07988 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 AL590560.3-201ENST00000623350 461 ntBASIC13.29□□□□□ -0.28
SFTPBP07988 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SFTPBP07988 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.29□□□□□ -0.28
SFTPBP07988 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 AC131212.3-201ENST00000624087 4219 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 AC236430.1-201ENST00000402231 743 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 RPL37AP1-201ENST00000412502 279 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.28□□□□□ -0.28
SFTPBP07988 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 TSPY16P-201ENST00000449843 468 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.28□□□□□ -0.28
SFTPBP07988 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.28□□□□□ -0.28
SFTPBP07988 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.28□□□□□ -0.28
SFTPBP07988 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.28□□□□□ -0.28
SFTPBP07988 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 AL390755.1-201ENST00000623716 2027 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms