Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC024681.1-201ENST00000521917 487 ntBASIC15.3■□□□□ 0.04
RETP07949 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.3■□□□□ 0.04
RETP07949 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.3■□□□□ 0.04
RETP07949 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 FAM45BP-202ENST00000592932 1624 ntBASIC15.3■□□□□ 0.04
RETP07949 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.3■□□□□ 0.04
RETP07949 HLA-C-210ENST00000640219 976 ntBASIC15.3■□□□□ 0.04
RETP07949 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RETP07949 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RETP07949 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RETP07949 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 TCAF2P1-201ENST00000291129 2421 ntBASIC15.29■□□□□ 0.04
RETP07949 AL109954.1-202ENST00000564051 2148 ntBASIC15.29■□□□□ 0.04
RETP07949 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RETP07949 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RETP07949 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.29■□□□□ 0.04
RETP07949 AC069218.1-201ENST00000435269 762 ntBASIC15.29■□□□□ 0.04
RETP07949 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 AC011742.3-201ENST00000439053 820 ntBASIC15.29■□□□□ 0.04
RETP07949 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RETP07949 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 AC005740.2-201ENST00000511085 419 ntBASIC15.29■□□□□ 0.04
RETP07949 RN7SL574P-201ENST00000581512 297 ntBASIC15.29■□□□□ 0.04
RETP07949 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.29■□□□□ 0.04
RETP07949 AL133499.1-201ENST00000596207 608 ntBASIC15.29■□□□□ 0.04
RETP07949 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.29■□□□□ 0.04
RETP07949 AC097359.3-201ENST00000603982 1210 ntBASIC15.29■□□□□ 0.04
RETP07949 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.29■□□□□ 0.04
RETP07949 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RETP07949 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.29■□□□□ 0.04
RETP07949 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RETP07949 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RETP07949 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.29■□□□□ 0.04
RETP07949 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RETP07949 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RETP07949 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.28■□□□□ 0.04
RETP07949 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RETP07949 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RETP07949 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RETP07949 KLF2P2-201ENST00000416807 1039 ntBASIC15.28■□□□□ 0.04
RETP07949 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 NUP210P1-202ENST00000504322 710 ntBASIC15.28■□□□□ 0.04
RETP07949 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RETP07949 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.28■□□□□ 0.04
RETP07949 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RETP07949 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RETP07949 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.28■□□□□ 0.04
RETP07949 MIR3147-201ENST00000577811 66 ntBASIC15.28■□□□□ 0.04
RETP07949 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.28■□□□□ 0.04
RETP07949 AC026740.1-201ENST00000607068 791 ntBASIC15.28■□□□□ 0.04
RETP07949 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
RETP07949 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms