Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ACKR1-201ENST00000368121 1240 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC114812.1-204ENST00000449669 728 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 KRT18P25-201ENST00000508931 1278 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 AP001889.1-201ENST00000525414 633 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 SLC25A47P1-201ENST00000531577 414 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC015936.2-201ENST00000593177 259 ntBASIC11.74□□□□□ -0.53
TRBV12-3P01733 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.74□□□□□ -0.53
TRBV12-3P01733 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRBV12-3P01733 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC023824.1-201ENST00000562945 2975 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 ACTBP8-201ENST00000403258 1108 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 EIF3FP3-201ENST00000434851 1086 ntBASIC11.73□□□□□ -0.53
TRBV12-3P01733 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRBV12-3P01733 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.73□□□□□ -0.53
TRBV12-3P01733 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms