Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
IFNA1P01562 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
IFNA1P01562 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
IFNA1P01562 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
IFNA1P01562 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.06□□□□□ -0.48
IFNA1P01562 KRT18P57-201ENST00000443599 1254 ntBASIC12.06□□□□□ -0.48
IFNA1P01562 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.06□□□□□ -0.48
IFNA1P01562 AC063952.2-201ENST00000498792 1227 ntBASIC12.06□□□□□ -0.48
IFNA1P01562 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.06□□□□□ -0.48
IFNA1P01562 AC109635.5-201ENST00000533593 962 ntBASIC12.06□□□□□ -0.48
IFNA1P01562 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.06□□□□□ -0.48
IFNA1P01562 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.06□□□□□ -0.48
IFNA1P01562 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.06□□□□□ -0.48
IFNA1P01562 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.06□□□□□ -0.48
IFNA1P01562 AC006011.2-201ENST00000621313 1158 ntBASIC12.06□□□□□ -0.48
IFNA1P01562 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
IFNA1P01562 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
IFNA1P01562 AC073548.1-201ENST00000624088 1882 ntBASIC12.06□□□□□ -0.48
IFNA1P01562 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.06□□□□□ -0.48
IFNA1P01562 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.05□□□□□ -0.48
IFNA1P01562 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
IFNA1P01562 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 KRT8P37-201ENST00000451609 1420 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
IFNA1P01562 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
IFNA1P01562 MRPL20P1-201ENST00000400819 433 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 LAGE3P1-201ENST00000425356 484 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.05□□□□□ -0.48
IFNA1P01562 KRT16P4-201ENST00000453883 522 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 AC012615.1-201ENST00000565797 1299 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
IFNA1P01562 AP002414.4-201ENST00000589764 1148 ntBASIC12.05□□□□□ -0.48
IFNA1P01562 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.05□□□□□ -0.48
IFNA1P01562 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
IFNA1P01562 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
IFNA1P01562 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
IFNA1P01562 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
IFNA1P01562 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 CR383656.2-201ENST00000548656 2254 ntBASIC12.04□□□□□ -0.48
IFNA1P01562 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms