Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TOM1O60784 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TOM1O60784 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.15■□□□□ 0.82
TOM1O60784 SLC25A15P1-201ENST00000456738 342 ntBASIC20.15■□□□□ 0.82
TOM1O60784 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.15■□□□□ 0.82
TOM1O60784 RN7SL277P-201ENST00000481521 288 ntBASIC20.15■□□□□ 0.82
TOM1O60784 RN7SL564P-201ENST00000496309 250 ntBASIC20.15■□□□□ 0.82
TOM1O60784 SLC25A15P3-201ENST00000505530 290 ntBASIC20.15■□□□□ 0.82
TOM1O60784 IGHV1-12-201ENST00000518307 205 ntBASIC20.15■□□□□ 0.82
TOM1O60784 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.15■□□□□ 0.82
TOM1O60784 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TOM1O60784 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TOM1O60784 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOM1O60784 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TOM1O60784 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TOM1O60784 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TOM1O60784 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TOM1O60784 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 AC007292.2-201ENST00000593524 1812 ntBASIC20.14■□□□□ 0.81
TOM1O60784 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TOM1O60784 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TOM1O60784 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.14■□□□□ 0.81
TOM1O60784 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.14■□□□□ 0.81
TOM1O60784 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
TOM1O60784 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.14■□□□□ 0.81
TOM1O60784 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.14■□□□□ 0.81
TOM1O60784 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.14■□□□□ 0.81
TOM1O60784 AC124068.2-201ENST00000569473 1109 ntBASIC20.14■□□□□ 0.81
TOM1O60784 TYMSP2-201ENST00000589501 424 ntBASIC20.14■□□□□ 0.81
TOM1O60784 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.14■□□□□ 0.81
TOM1O60784 NF1P11-201ENST00000621292 1282 ntBASIC20.14■□□□□ 0.81
TOM1O60784 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.14■□□□□ 0.81
TOM1O60784 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TOM1O60784 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.14■□□□□ 0.81
TOM1O60784 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TOM1O60784 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
TOM1O60784 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TOM1O60784 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC20.13■□□□□ 0.81
TOM1O60784 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.13■□□□□ 0.81
TOM1O60784 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.13■□□□□ 0.81
TOM1O60784 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TOM1O60784 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.13■□□□□ 0.81
TOM1O60784 BX088651.3-201ENST00000418155 352 ntBASIC20.13■□□□□ 0.81
TOM1O60784 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.13■□□□□ 0.81
TOM1O60784 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.13■□□□□ 0.81
TOM1O60784 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TOM1O60784 STK24P1-201ENST00000455035 1291 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms