Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.86□□□□□ -0.51
CUBNO60494 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.86□□□□□ -0.51
CUBNO60494 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 AL391005.1-201ENST00000623953 2435 ntBASIC11.86□□□□□ -0.51
CUBNO60494 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.86□□□□□ -0.51
CUBNO60494 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CUBNO60494 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.86□□□□□ -0.51
CUBNO60494 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CUBNO60494 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CUBNO60494 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 AL807761.2-201ENST00000422849 729 ntBASIC11.86□□□□□ -0.51
CUBNO60494 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC11.86□□□□□ -0.51
CUBNO60494 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.86□□□□□ -0.51
CUBNO60494 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC11.86□□□□□ -0.51
CUBNO60494 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 AC007952.4-201ENST00000573866 637 ntBASIC11.86□□□□□ -0.51
CUBNO60494 AC018695.6-201ENST00000614011 534 ntBASIC11.86□□□□□ -0.51
CUBNO60494 AC009145.4-201ENST00000625119 1294 ntBASIC11.86□□□□□ -0.51
CUBNO60494 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.86□□□□□ -0.51
CUBNO60494 AC002472.3-201ENST00000640124 621 ntBASIC11.86□□□□□ -0.51
CUBNO60494 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.86□□□□□ -0.51
CUBNO60494 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CUBNO60494 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.85□□□□□ -0.51
CUBNO60494 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CUBNO60494 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.85□□□□□ -0.51
CUBNO60494 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC11.85□□□□□ -0.51
CUBNO60494 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 AC006058.4-201ENST00000624016 1670 ntBASIC11.85□□□□□ -0.51
CUBNO60494 NHP2-202ENST00000314397 599 ntTSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.85□□□□□ -0.51
CUBNO60494 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC11.85□□□□□ -0.51
CUBNO60494 NUDT4P2-201ENST00000578341 546 ntBASIC11.85□□□□□ -0.51
CUBNO60494 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.85□□□□□ -0.51
CUBNO60494 ENPP7P8-202ENST00000527856 1345 ntBASIC11.85□□□□□ -0.51
CUBNO60494 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC11.85□□□□□ -0.51
CUBNO60494 AC090510.3-201ENST00000615831 821 ntBASIC11.85□□□□□ -0.51
CUBNO60494 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CUBNO60494 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CUBNO60494 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CUBNO60494 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 TSPY25P-201ENST00000429463 745 ntBASIC11.84□□□□□ -0.51
CUBNO60494 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms