Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ZIC3O60481 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 FKBP4P6-201ENST00000457486 1332 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZIC3O60481 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 FAM21FP-201ENST00000426241 1131 ntBASIC13.6□□□□□ -0.23
ZIC3O60481 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.6□□□□□ -0.23
ZIC3O60481 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.6□□□□□ -0.23
ZIC3O60481 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.6□□□□□ -0.23
ZIC3O60481 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 AP003171.2-201ENST00000528208 925 ntBASIC13.6□□□□□ -0.23
ZIC3O60481 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 C2orf69P2-201ENST00000562032 1123 ntBASIC13.6□□□□□ -0.23
ZIC3O60481 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 OR10B1P-201ENST00000601666 907 ntBASIC13.6□□□□□ -0.23
ZIC3O60481 INE2-201ENST00000630399 1874 ntBASIC13.6□□□□□ -0.23
ZIC3O60481 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZIC3O60481 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC3O60481 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC3O60481 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC3O60481 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC3O60481 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC3O60481 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC3O60481 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC3O60481 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
ZIC3O60481 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms