Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 BOLA2P3-201ENST00000404566 256 ntBASIC16.42■□□□□ 0.22
EXTL3O43909 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.42■□□□□ 0.22
EXTL3O43909 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 RNA5SP486-201ENST00000515961 83 ntBASIC16.42■□□□□ 0.22
EXTL3O43909 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.42■□□□□ 0.22
EXTL3O43909 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 KRT90P-201ENST00000549264 1064 ntBASIC16.42■□□□□ 0.22
EXTL3O43909 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.42■□□□□ 0.22
EXTL3O43909 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EXTL3O43909 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EXTL3O43909 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
EXTL3O43909 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.42■□□□□ 0.22
EXTL3O43909 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 TPM3P8-201ENST00000330554 643 ntBASIC16.41■□□□□ 0.22
EXTL3O43909 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 CNN2P8-201ENST00000421872 913 ntBASIC16.41■□□□□ 0.22
EXTL3O43909 FAM197Y7-201ENST00000432892 766 ntBASIC16.41■□□□□ 0.22
EXTL3O43909 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.41■□□□□ 0.22
EXTL3O43909 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.41■□□□□ 0.22
EXTL3O43909 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.41■□□□□ 0.22
EXTL3O43909 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EXTL3O43909 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
EXTL3O43909 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC013726.1-201ENST00000563747 2285 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 PDIA3P1-201ENST00000471856 1510 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.4■□□□□ 0.22
EXTL3O43909 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
EXTL3O43909 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC234783.1-201ENST00000441761 496 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 AC119751.2-201ENST00000504529 210 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 AC092658.1-201ENST00000505836 891 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms