Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.33■□□□□ 0.04
KDELR3O43731 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.33■□□□□ 0.04
KDELR3O43731 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 AC099336.1-201ENST00000417053 1171 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 HLA-V-201ENST00000429037 534 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KDELR3O43731 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.33■□□□□ 0.04
KDELR3O43731 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.33■□□□□ 0.04
KDELR3O43731 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 AC023310.1-201ENST00000554836 735 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 AC106820.3-201ENST00000561653 397 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.33■□□□□ 0.04
KDELR3O43731 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 FKBP4P6-201ENST00000457486 1332 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 AL354989.2-201ENST00000435838 1540 ntBASIC15.33■□□□□ 0.04
KDELR3O43731 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.33■□□□□ 0.04
KDELR3O43731 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDELR3O43731 AC011270.2-201ENST00000624293 2550 ntBASIC15.32■□□□□ 0.04
KDELR3O43731 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.32■□□□□ 0.04
KDELR3O43731 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 TLE1P1-201ENST00000422965 589 ntBASIC15.32■□□□□ 0.04
KDELR3O43731 AC007969.1-201ENST00000433675 447 ntBASIC15.32■□□□□ 0.04
KDELR3O43731 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.32■□□□□ 0.04
KDELR3O43731 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.32■□□□□ 0.04
KDELR3O43731 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KDELR3O43731 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.32■□□□□ 0.04
KDELR3O43731 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 AL138725.1-201ENST00000407347 1314 ntBASIC15.32■□□□□ 0.04
KDELR3O43731 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.32■□□□□ 0.04
KDELR3O43731 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDELR3O43731 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.32■□□□□ 0.04
KDELR3O43731 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.31■□□□□ 0.04
KDELR3O43731 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.31■□□□□ 0.04
KDELR3O43731 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
KDELR3O43731 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 NORAD-201ENST00000565493 5339 ntBASIC15.31■□□□□ 0.04
KDELR3O43731 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KDELR3O43731 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.31■□□□□ 0.04
KDELR3O43731 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.31■□□□□ 0.04
KDELR3O43731 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KDELR3O43731 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDELR3O43731 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms