Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.83■□□□□ 0.13
SOX1O00570 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX1O00570 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX1O00570 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SOX1O00570 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX1O00570 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SOX1O00570 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SOX1O00570 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SOX1O00570 AC018629.1-201ENST00000623381 1736 ntBASIC15.83■□□□□ 0.13
SOX1O00570 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SOX1O00570 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.83■□□□□ 0.12
SOX1O00570 AC018695.7-201ENST00000624587 2492 ntBASIC15.83■□□□□ 0.12
SOX1O00570 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SOX1O00570 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 AC108724.1-201ENST00000481669 352 ntBASIC15.83■□□□□ 0.12
SOX1O00570 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.83■□□□□ 0.12
SOX1O00570 IGHEP2-201ENST00000519308 1256 ntBASIC15.83■□□□□ 0.12
SOX1O00570 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC15.83■□□□□ 0.12
SOX1O00570 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SOX1O00570 FBXO36P1-201ENST00000579006 471 ntBASIC15.83■□□□□ 0.12
SOX1O00570 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.83■□□□□ 0.12
SOX1O00570 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX1O00570 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.83■□□□□ 0.12
SOX1O00570 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX1O00570 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 SIGLEC20P-201ENST00000595243 1311 ntBASIC15.83■□□□□ 0.12
SOX1O00570 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX1O00570 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.83■□□□□ 0.12
SOX1O00570 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 TMBIM7P-202ENST00000641474 1516 ntBASIC15.83■□□□□ 0.12
SOX1O00570 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX1O00570 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SOX1O00570 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
SOX1O00570 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SOX1O00570 XBP1P1-201ENST00000436573 652 ntBASIC15.82■□□□□ 0.12
SOX1O00570 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 GPX3-202ENST00000517973 612 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX1O00570 AC092862.1-201ENST00000541534 533 ntBASIC15.82■□□□□ 0.12
SOX1O00570 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 AL450487.2-201ENST00000615934 407 ntBASIC15.82■□□□□ 0.12
SOX1O00570 AC133540.1-201ENST00000620845 1019 ntBASIC15.82■□□□□ 0.12
SOX1O00570 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX1O00570 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX1O00570 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms