Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 AC093525.8-201ENST00000624099 1342 ntBASIC12.2□□□□□ -0.46
UPK2O00526 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.2□□□□□ -0.46
UPK2O00526 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 AL645937.2-201ENST00000396808 931 ntBASIC12.2□□□□□ -0.46
UPK2O00526 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.2□□□□□ -0.46
UPK2O00526 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 AP001160.2-201ENST00000596071 487 ntBASIC12.2□□□□□ -0.46
UPK2O00526 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK2O00526 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 DRD5P1-201ENST00000456605 1438 ntBASIC12.2□□□□□ -0.46
UPK2O00526 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.2□□□□□ -0.46
UPK2O00526 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UPK2O00526 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 AC018665.1-201ENST00000622927 1362 ntBASIC12.19□□□□□ -0.46
UPK2O00526 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UPK2O00526 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.19□□□□□ -0.46
UPK2O00526 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 AL353779.1-201ENST00000434793 351 ntBASIC12.19□□□□□ -0.46
UPK2O00526 AL589987.1-201ENST00000453380 819 ntBASIC12.19□□□□□ -0.46
UPK2O00526 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 FAM86LP-201ENST00000478302 853 ntBASIC12.19□□□□□ -0.46
UPK2O00526 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.19□□□□□ -0.46
UPK2O00526 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 AC135586.1-201ENST00000539323 574 ntBASIC12.19□□□□□ -0.46
UPK2O00526 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 AC036164.1-201ENST00000570544 333 ntBASIC12.19□□□□□ -0.46
UPK2O00526 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms