Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLIC1O00299 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.35□□□□□ -0.11
CLIC1O00299 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC125807.1-201ENST00000483097 614 ntBASIC14.35□□□□□ -0.11
CLIC1O00299 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC134684.3-201ENST00000641758 218 ntBASIC14.35□□□□□ -0.11
CLIC1O00299 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLIC1O00299 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLIC1O00299 AC006504.5-208ENST00000588784 2401 ntBASIC14.35□□□□□ -0.11
CLIC1O00299 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.35□□□□□ -0.11
CLIC1O00299 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLIC1O00299 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLIC1O00299 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLIC1O00299 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 AC015802.1-201ENST00000588104 1449 ntBASIC14.34□□□□□ -0.11
CLIC1O00299 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CLIC1O00299 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.34□□□□□ -0.11
CLIC1O00299 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.34□□□□□ -0.11
CLIC1O00299 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 ZNF890P-202ENST00000530367 1156 ntBASIC14.34□□□□□ -0.11
CLIC1O00299 AC092865.5-201ENST00000545435 363 ntBASIC14.34□□□□□ -0.11
CLIC1O00299 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.34□□□□□ -0.11
CLIC1O00299 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 AL596442.2-201ENST00000610240 980 ntBASIC14.34□□□□□ -0.11
CLIC1O00299 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.34□□□□□ -0.11
CLIC1O00299 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.34□□□□□ -0.11
CLIC1O00299 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.34□□□□□ -0.11
CLIC1O00299 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLIC1O00299 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.34□□□□□ -0.11
CLIC1O00299 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLIC1O00299 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms