Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
PDLIM1O00151 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.56□□□□□ -0.08
PDLIM1O00151 PRYP6-201ENST00000514804 343 ntBASIC14.56□□□□□ -0.08
PDLIM1O00151 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDLIM1O00151 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AC004835.2-201ENST00000603762 682 ntBASIC14.56□□□□□ -0.08
PDLIM1O00151 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 BEND3P3-201ENST00000611030 2440 ntBASIC14.56□□□□□ -0.08
PDLIM1O00151 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDLIM1O00151 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AC087386.2-201ENST00000623212 4637 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 RPS8P6-201ENST00000426177 609 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 KRT8P23-201ENST00000560090 1207 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 AC093520.2-201ENST00000561830 333 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 SNHG9-202ENST00000564014 471 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AL450472.2-201ENST00000603663 1156 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 AC027612.4-201ENST00000605371 583 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 AL596442.2-201ENST00000610240 980 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 AC008267.7-201ENST00000624570 1194 ntBASIC14.55□□□□□ -0.08
PDLIM1O00151 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM1O00151 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM1O00151 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM1O00151 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM1O00151 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 AP000845.1-201ENST00000581677 2131 ntBASIC14.54□□□□□ -0.08
PDLIM1O00151 MST1P2-201ENST00000457982 2291 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms