Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MPI-203ENST00000535694 1523 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC126365.1-201ENST00000578585 1514 ntBASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 FHAD1-202ENST00000358897 5090 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TRPV3-211ENST00000616411 5742 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC132938.5-201ENST00000624980 1813 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC112693.3-201ENST00000624819 1983 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC29A4P1-201ENST00000398760 971 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 KRT17P3-201ENST00000420566 1262 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PHB2-202ENST00000440277 996 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 RNF121-214ENST00000533380 870 ntTSL 3 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PGM5P2-202ENST00000637225 1043 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AL023875.1-201ENST00000640777 796 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AL445209.1-201ENST00000607269 3491 ntBASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CHKB-CPT1BH3BT56 AC105250.1-201ENST00000509378 2057 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 302.5 ms