Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 MIR658-201ENST00000385210 100 ntBASIC12.72□□□□□ -0.37
SRRM5B3KS81 AC005229.1-201ENST00000392885 409 ntBASIC12.72□□□□□ -0.37
SRRM5B3KS81 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 HLA-V-201ENST00000429037 534 ntBASIC12.72□□□□□ -0.37
SRRM5B3KS81 USP32P1-208ENST00000506594 1164 ntBASIC12.72□□□□□ -0.37
SRRM5B3KS81 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 CICP23-201ENST00000605013 2741 ntBASIC12.72□□□□□ -0.37
SRRM5B3KS81 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM5B3KS81 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM5B3KS81 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 AC011270.2-201ENST00000624293 2550 ntBASIC12.71□□□□□ -0.37
SRRM5B3KS81 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPS2P32-201ENST00000439199 892 ntBASIC12.71□□□□□ -0.37
SRRM5B3KS81 AC026434.2-201ENST00000506094 1078 ntBASIC12.71□□□□□ -0.37
SRRM5B3KS81 AC106760.1-201ENST00000508690 800 ntBASIC12.71□□□□□ -0.37
SRRM5B3KS81 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 AP001889.1-201ENST00000525414 633 ntBASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM5B3KS81 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM5B3KS81 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms