Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.77□□□□□ -0.2
TMEM129A0AVI4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TMEM129A0AVI4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.77□□□□□ -0.2
TMEM129A0AVI4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM129A0AVI4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM129A0AVI4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 REXO1L4P-201ENST00000605109 1937 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC008738.7-201ENST00000609744 511 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC005252.3-201ENST00000623855 2258 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AC008761.3-201ENST00000624803 892 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 AL645728.2-202ENST00000641679 227 ntBASIC13.77□□□□□ -0.21
TMEM129A0AVI4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM129A0AVI4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 AC007787.1-201ENST00000588095 1583 ntBASIC13.76□□□□□ -0.21
TMEM129A0AVI4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 AC104457.1-201ENST00000401024 814 ntBASIC13.76□□□□□ -0.21
TMEM129A0AVI4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM129A0AVI4 TPT1P11-201ENST00000458482 498 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms