Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 PTENP1-202ENST00000532280 3996 ntBASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV3S1A0A5B6 FAM90A12P-201ENST00000519497 2375 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 FAM90A24P-201ENST00000520792 2369 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC007967.2-201ENST00000432613 625 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SPDYE11-202ENST00000450699 704 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SPDYE9P-201ENST00000570642 692 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AL133215.2-201ENST00000609242 977 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC026120.1-201ENST00000611536 926 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SPDYE10P-202ENST00000612005 668 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SPDYE8P-202ENST00000612377 668 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AC092902.6-201ENST00000641783 218 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 AL121723.1-201ENST00000445194 1519 ntBASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV3S1A0A5B6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV3S1A0A5B6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms