Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AC013268.4-201ENST00000637413 2228 ntBASIC20.52■□□□□ 0.88
NINLQ9Y2I6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.52■□□□□ 0.88
NINLQ9Y2I6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AC114501.1-201ENST00000445949 172 ntBASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AC005077.2-201ENST00000449786 690 ntBASIC20.52■□□□□ 0.88
NINLQ9Y2I6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 AL109954.1-202ENST00000564051 2148 ntBASIC20.52■□□□□ 0.88
NINLQ9Y2I6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
NINLQ9Y2I6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
NINLQ9Y2I6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NINLQ9Y2I6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NINLQ9Y2I6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NINLQ9Y2I6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 ZBED1P1-201ENST00000502364 1930 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 DPM3-202ENST00000368399 517 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 NKAIN1P1-201ENST00000435754 582 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 AC022217.1-201ENST00000521069 738 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 E2F3P2-201ENST00000447755 1422 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 SALL4P5-201ENST00000419001 1760 ntBASIC20.51■□□□□ 0.87
NINLQ9Y2I6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.51■□□□□ 0.87
NINLQ9Y2I6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 PUDPP3-201ENST00000445368 636 ntBASIC20.5■□□□□ 0.87
NINLQ9Y2I6 HIST2H2BC-201ENST00000498492 580 ntBASIC20.5■□□□□ 0.87
NINLQ9Y2I6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 CHMP4BP1-201ENST00000556017 588 ntBASIC20.5■□□□□ 0.87
NINLQ9Y2I6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 AL645939.5-201ENST00000606834 243 ntBASIC20.5■□□□□ 0.87
NINLQ9Y2I6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms