Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSFQ9UBX1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 TMBIM7P-203ENST00000641617 1718 ntBASIC14.29□□□□□ -0.12
CTSFQ9UBX1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC023024.2-201ENST00000623561 1993 ntBASIC14.29□□□□□ -0.12
CTSFQ9UBX1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CD8B2-202ENST00000417670 633 ntBASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 RN7SL560P-201ENST00000577943 264 ntBASIC14.29□□□□□ -0.12
CTSFQ9UBX1 MIR4741-201ENST00000579822 90 ntBASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSFQ9UBX1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSFQ9UBX1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms