Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 IGHV3-62-201ENST00000520057 340 ntBASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 LINC01225-203ENST00000563550 1244 ntBASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC026120.1-201ENST00000611536 926 ntBASIC13.93□□□□□ -0.18
CLN6Q9NWW5 AC092902.6-201ENST00000641783 218 ntBASIC13.93□□□□□ -0.18
CLN6Q9NWW5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 MST1P2-201ENST00000457982 2291 ntBASIC13.93□□□□□ -0.18
CLN6Q9NWW5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLN6Q9NWW5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 FO393414.2-201ENST00000405153 598 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 MED15P5-201ENST00000423150 992 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 FAM58CP-201ENST00000435741 640 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 KRT18P3-201ENST00000451602 1288 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 AC027601.4-201ENST00000611259 610 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 AC011474.4-201ENST00000623523 2076 ntBASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLN6Q9NWW5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLN6Q9NWW5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms