Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBQLN4Q9NRR5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 RNU1-114P-201ENST00000365297 166 ntBASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC011495.1-201ENST00000498085 584 ntBASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AC025048.6-201ENST00000634326 1161 ntBASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 AL358472.5-202ENST00000641448 1267 ntBASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UBQLN4Q9NRR5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
UBQLN4Q9NRR5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms