Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CICP11-201ENST00000434745 2827 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 FOXO1B-201ENST00000504678 1527 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC018529.2-202ENST00000611482 3087 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AL139010.1-201ENST00000454878 894 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC079776.4-201ENST00000511039 504 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 RARRES2P8-201ENST00000566335 367 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC018845.2-201ENST00000568326 409 ntBASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.24□□□□□ -0.77
SND1-IT1Q9HBX3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms