Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 COX5BP1-201ENST00000507622 393 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 NIFKP4-201ENST00000567275 1192 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PPY2P-201ENST00000582808 702 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ENPP7P14-201ENST00000621765 1040 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AL391262.2-201ENST00000622466 494 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PRSS30P-206ENST00000641773 873 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AL360270.3-201ENST00000609118 1348 ntBASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRTAP4-3Q9BYR4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 KRT8P14-201ENST00000414254 1442 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms