Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC074138.1-201ENST00000611182 1303 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 AC026320.2-201ENST00000434379 478 ntBASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 AC006122.1-201ENST00000493323 440 ntBASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 AL109837.1-201ENST00000603272 613 ntBASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 AC027601.3-201ENST00000622907 509 ntBASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.16■□□□□ 0.5
RTFDC1Q9BY42 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC144522.1-201ENST00000625111 1658 ntBASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AL627389.1-201ENST00000413508 1182 ntBASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTFDC1Q9BY42 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTFDC1Q9BY42 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RTFDC1Q9BY42 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 OR6D1P-203ENST00000641209 4860 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 CYP4F23P-201ENST00000593402 1579 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms