Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AC004840.1-201ENST00000636359 365 ntBASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 WASH3P-207ENST00000560956 1394 ntBASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TUBA1CQ9BQE3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC135586.1-201ENST00000539323 574 ntBASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC190387.1-201ENST00000551683 408 ntBASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC044860.1-202ENST00000559481 777 ntBASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 AC004233.3-201ENST00000607794 1269 ntBASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms