Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.48■□□□□ 0.71
ABCA3Q99758 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AC226150.1-201ENST00000544259 466 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.48■□□□□ 0.71
ABCA3Q99758 KLF17P1-201ENST00000547105 1126 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ABCA3Q99758 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ABCA3Q99758 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 AC092135.3-201ENST00000624151 1846 ntBASIC19.47■□□□□ 0.71
ABCA3Q99758 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 AGGF1P1-201ENST00000509500 2073 ntBASIC19.47■□□□□ 0.71
ABCA3Q99758 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.47■□□□□ 0.71
ABCA3Q99758 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 AL132994.1-201ENST00000554098 400 ntBASIC19.47■□□□□ 0.71
ABCA3Q99758 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.47■□□□□ 0.71
ABCA3Q99758 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC19.47■□□□□ 0.71
ABCA3Q99758 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 MIR6746-201ENST00000620971 63 ntBASIC19.47■□□□□ 0.71
ABCA3Q99758 AC090386.2-201ENST00000623010 1039 ntBASIC19.47■□□□□ 0.71
ABCA3Q99758 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ABCA3Q99758 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ABCA3Q99758 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.47■□□□□ 0.71
ABCA3Q99758 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.47■□□□□ 0.71
ABCA3Q99758 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ABCA3Q99758 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
ABCA3Q99758 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
ABCA3Q99758 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ABCA3Q99758 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ABCA3Q99758 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 AC004522.1-201ENST00000419978 654 ntBASIC19.46■□□□□ 0.71
ABCA3Q99758 GNG10P1-201ENST00000452289 199 ntBASIC19.46■□□□□ 0.71
ABCA3Q99758 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.46■□□□□ 0.71
ABCA3Q99758 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.46■□□□□ 0.71
ABCA3Q99758 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.46■□□□□ 0.71
ABCA3Q99758 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.46■□□□□ 0.71
ABCA3Q99758 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.46■□□□□ 0.71
ABCA3Q99758 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCA3Q99758 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ABCA3Q99758 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.45■□□□□ 0.7
ABCA3Q99758 RNVU1-8-201ENST00000364272 125 ntBASIC19.45■□□□□ 0.7
ABCA3Q99758 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AL929302.1-201ENST00000426556 871 ntBASIC19.45■□□□□ 0.7
ABCA3Q99758 AC083801.1-201ENST00000491689 358 ntBASIC19.45■□□□□ 0.7
ABCA3Q99758 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.45■□□□□ 0.7
ABCA3Q99758 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.45■□□□□ 0.7
ABCA3Q99758 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ABCA3Q99758 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ABCA3Q99758 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.45■□□□□ 0.7
ABCA3Q99758 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.45■□□□□ 0.7
ABCA3Q99758 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.45■□□□□ 0.7
ABCA3Q99758 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 AC092850.2-201ENST00000623821 2697 ntBASIC19.45■□□□□ 0.7
ABCA3Q99758 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCA3Q99758 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCA3Q99758 RNA5SP406-201ENST00000516106 112 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms