Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
MUC4Q99102 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
MUC4Q99102 CICP4-201ENST00000447359 2812 ntBASIC11.15□□□□□ -0.63
MUC4Q99102 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
MUC4Q99102 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
MUC4Q99102 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MUC4Q99102 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.15□□□□□ -0.63
MUC4Q99102 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MUC4Q99102 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.15□□□□□ -0.63
MUC4Q99102 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.14□□□□□ -0.63
MUC4Q99102 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 FAM8A2P-201ENST00000528813 1142 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 AL844908.2-201ENST00000609461 460 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 MIR6805-201ENST00000615055 62 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
MUC4Q99102 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 AC079776.1-201ENST00000401540 1152 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 BASP1P1-201ENST00000430708 665 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 AC241585.1-201ENST00000433527 519 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 AC027369.6-201ENST00000525520 931 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 AL109936.8-201ENST00000641772 604 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.14□□□□□ -0.63
MUC4Q99102 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 AC022144.1-201ENST00000602255 1580 ntBASIC11.14□□□□□ -0.63
MUC4Q99102 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.14□□□□□ -0.63
MUC4Q99102 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
MUC4Q99102 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MUC4Q99102 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MUC4Q99102 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
MUC4Q99102 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MUC4Q99102 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
MUC4Q99102 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
MUC4Q99102 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.13□□□□□ -0.63
MUC4Q99102 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MUC4Q99102 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms