Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 REXO1L2P-201ENST00000425429 2069 ntBASIC18.77■□□□□ 0.59
CCDC85AQ96PX6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC011270.2-201ENST00000624293 2550 ntBASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 POM121L10P-201ENST00000436994 1285 ntBASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC020914.3-201ENST00000594712 304 ntBASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC85AQ96PX6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AC011840.2-201ENST00000563063 1520 ntBASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 SLC25A24P2-201ENST00000415059 510 ntBASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC85AQ96PX6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 AC012508.2-201ENST00000567613 1472 ntBASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms