Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 AC022494.1-201ENST00000466044 728 ntBASIC13.81□□□□□ -0.2
LRRC46Q96FV0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 AC093813.1-201ENST00000605066 256 ntBASIC13.81□□□□□ -0.2
LRRC46Q96FV0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 REXO1L1P-202ENST00000608646 1974 ntBASIC13.81□□□□□ -0.2
LRRC46Q96FV0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC46Q96FV0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PPT1-215ENST00000641471 2368 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PCDHA3-202ENST00000532566 4594 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC016694.1-201ENST00000434179 700 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 YBX1P6-201ENST00000442962 1002 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 BCRP2-202ENST00000447763 634 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PFN1P12-201ENST00000455938 534 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 BCRP6-201ENST00000510112 632 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 BCRP7-201ENST00000511549 544 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 RNA5SP412-201ENST00000516234 123 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AC007292.2-201ENST00000593524 1812 ntBASIC13.8□□□□□ -0.2
LRRC46Q96FV0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC46Q96FV0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 AL122018.1-201ENST00000446607 2310 ntBASIC13.79□□□□□ -0.2
LRRC46Q96FV0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC46Q96FV0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms