Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 INTS4P2-202ENST00000614726 2019 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM11Q96F44 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 AC018529.2-202ENST00000611482 3087 ntBASIC16.08■□□□□ 0.17
TRIM11Q96F44 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM11Q96F44 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM11Q96F44 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM11Q96F44 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRIM11Q96F44 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC134915.1-201ENST00000426461 574 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC120045.2-201ENST00000567334 178 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC005498.2-205ENST00000593218 784 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC009118.2-201ENST00000613275 655 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 AC007191.1-201ENST00000623179 2995 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 PRSS30P-206ENST00000641773 873 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AL122018.1-201ENST00000446607 2310 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 MTHFR-210ENST00000641407 2387 ntBASIC16.08■□□□□ 0.16
TRIM11Q96F44 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM11Q96F44 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM11Q96F44 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 AC007686.3-201ENST00000619017 3487 ntBASIC16.07■□□□□ 0.16
TRIM11Q96F44 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.07■□□□□ 0.16
TRIM11Q96F44 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 GPALPP1-207ENST00000611650 899 ntBASIC16.07■□□□□ 0.16
TRIM11Q96F44 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 AL137783.1-201ENST00000623494 1896 ntBASIC16.07■□□□□ 0.16
TRIM11Q96F44 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms