Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.43■□□□□ 0.22
PGBD4Q96DM1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AL391280.1-201ENST00000506969 1062 ntBASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC138466.3-201ENST00000619983 221 ntBASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC244452.3-201ENST00000636814 210 ntBASIC16.43■□□□□ 0.22
PGBD4Q96DM1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AC090616.6-203ENST00000579186 1945 ntBASIC16.43■□□□□ 0.22
PGBD4Q96DM1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PGBD4Q96DM1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 AC012508.2-201ENST00000567613 1472 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 AC144831.1-201ENST00000573312 2656 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 MIR663B-201ENST00000408361 115 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 POM121L10P-201ENST00000436994 1285 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 HSPB1P2-201ENST00000448722 546 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 MESTP3-201ENST00000503460 968 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 AC106820.3-201ENST00000561653 397 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 AC073413.1-201ENST00000603927 732 ntBASIC16.42■□□□□ 0.22
PGBD4Q96DM1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PGBD4Q96DM1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.41■□□□□ 0.22
PGBD4Q96DM1 ZNF767P-206ENST00000513792 565 ntBASIC16.41■□□□□ 0.22
PGBD4Q96DM1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms