Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 YBX1P5-201ENST00000509441 847 ntBASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AC025048.3-201ENST00000590609 569 ntBASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AL589739.1-201ENST00000607720 493 ntBASIC14.66□□□□□ -0.06
VPS33AQ96AX1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 AC005702.4-201ENST00000618393 416 ntBASIC14.66□□□□□ -0.06
VPS33AQ96AX1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VPS33AQ96AX1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 AC007787.1-201ENST00000588095 1583 ntBASIC14.65□□□□□ -0.06
VPS33AQ96AX1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms