Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.53■□□□□ 0.56
RPGRQ92834 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RPGRQ92834 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.53■□□□□ 0.56
RPGRQ92834 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPGRQ92834 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPGRQ92834 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPGRQ92834 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RPGRQ92834 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RPGRQ92834 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.52■□□□□ 0.56
RPGRQ92834 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.52■□□□□ 0.56
RPGRQ92834 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RPGRQ92834 SCARNA21-201ENST00000517026 139 ntBASIC18.52■□□□□ 0.56
RPGRQ92834 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 MIR4754-201ENST00000582477 89 ntBASIC18.52■□□□□ 0.56
RPGRQ92834 RN7SL555P-201ENST00000584742 339 ntBASIC18.52■□□□□ 0.56
RPGRQ92834 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.52■□□□□ 0.56
RPGRQ92834 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RPGRQ92834 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.52■□□□□ 0.56
RPGRQ92834 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RPGRQ92834 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPGRQ92834 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.52■□□□□ 0.55
RPGRQ92834 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPGRQ92834 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPGRQ92834 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPGRQ92834 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.51■□□□□ 0.55
RPGRQ92834 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.51■□□□□ 0.55
RPGRQ92834 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.51■□□□□ 0.55
RPGRQ92834 NOC2LP1-201ENST00000450578 752 ntBASIC18.51■□□□□ 0.55
RPGRQ92834 POU5F1P2-201ENST00000521750 823 ntBASIC18.51■□□□□ 0.55
RPGRQ92834 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
RPGRQ92834 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.51■□□□□ 0.55
RPGRQ92834 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.51■□□□□ 0.55
RPGRQ92834 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 FAM90A7P-201ENST00000382628 1395 ntBASIC18.51■□□□□ 0.55
RPGRQ92834 FAM90A23P-201ENST00000400136 1395 ntBASIC18.51■□□□□ 0.55
RPGRQ92834 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
RPGRQ92834 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.51■□□□□ 0.55
RPGRQ92834 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RPGRQ92834 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPGRQ92834 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 TBC1D3J-201ENST00000620719 1426 ntBASIC18.5■□□□□ 0.55
RPGRQ92834 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPGRQ92834 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPGRQ92834 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPGRQ92834 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPGRQ92834 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.5■□□□□ 0.55
RPGRQ92834 AC026316.1-201ENST00000398900 414 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms