Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEFF1Q8IYR6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 HLA-K-203ENST00000430151 1046 ntBASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AL161670.2-201ENST00000557650 1227 ntBASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AC100827.2-201ENST00000563214 1194 ntBASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AF254983.2-201ENST00000612331 135 ntBASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 AP005117.1-202ENST00000581724 1908 ntBASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEFF1Q8IYR6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 AL157791.1-201ENST00000553667 1699 ntBASIC15□□□□□ -0.01
TMEFF1Q8IYR6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 AC006480.2-201ENST00000609770 1337 ntBASIC15□□□□□ -0.01
TMEFF1Q8IYR6 AC092978.1-202ENST00000637590 1327 ntBASIC15□□□□□ -0.01
TMEFF1Q8IYR6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15□□□□□ -0.01
TMEFF1Q8IYR6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15□□□□□ -0.01
TMEFF1Q8IYR6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms