Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 AC095040.1-201ENST00000513286 675 ntBASIC20.84■□□□□ 0.93
UBR1Q8IWV7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 ABHD17AP9-201ENST00000561925 548 ntBASIC20.84■□□□□ 0.93
UBR1Q8IWV7 AC006483.2-201ENST00000609813 515 ntBASIC20.84■□□□□ 0.93
UBR1Q8IWV7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 MME-218ENST00000625667 363 ntTSL 5 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.84■□□□□ 0.93
UBR1Q8IWV7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 AC092850.2-201ENST00000623821 2697 ntBASIC20.83■□□□□ 0.93
UBR1Q8IWV7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBR1Q8IWV7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBR1Q8IWV7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 AC023024.2-201ENST00000623561 1993 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 PPP1R2P4-201ENST00000424051 595 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 AC226150.1-201ENST00000544259 466 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 AC010632.2-201ENST00000588369 1224 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 AP005117.1-202ENST00000581724 1908 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 AC092135.3-201ENST00000624151 1846 ntBASIC20.82■□□□□ 0.92
UBR1Q8IWV7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBR1Q8IWV7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 AC018638.5-201ENST00000450885 754 ntBASIC20.81■□□□□ 0.92
UBR1Q8IWV7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
UBR1Q8IWV7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms