Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 AL035414.1-201ENST00000451327 857 ntBASIC18.66■□□□□ 0.58
COL23A1Q86Y22 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 RNA5SP417-201ENST00000516459 108 ntBASIC18.66■□□□□ 0.58
COL23A1Q86Y22 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 AC012073.1-201ENST00000606114 1108 ntBASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 AL139384.1-201ENST00000612143 3047 ntBASIC18.66■□□□□ 0.58
COL23A1Q86Y22 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 MARK2P16-201ENST00000605714 1723 ntBASIC18.66■□□□□ 0.58
COL23A1Q86Y22 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
COL23A1Q86Y22 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 TMBIM7P-202ENST00000641474 1516 ntBASIC18.65■□□□□ 0.58
COL23A1Q86Y22 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 DUX4L50-201ENST00000455245 715 ntBASIC18.65■□□□□ 0.58
COL23A1Q86Y22 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 FAM86B3P-203ENST00000523992 854 ntBASIC18.65■□□□□ 0.58
COL23A1Q86Y22 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL23A1Q86Y22 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
COL23A1Q86Y22 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL23A1Q86Y22 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
COL23A1Q86Y22 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 GUSBP10-201ENST00000417412 665 ntBASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC007952.4-201ENST00000573866 637 ntBASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC011471.3-201ENST00000623576 402 ntBASIC18.64■□□□□ 0.57
COL23A1Q86Y22 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 REXO1L2P-201ENST00000425429 2069 ntBASIC18.64■□□□□ 0.57
COL23A1Q86Y22 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.64■□□□□ 0.57
COL23A1Q86Y22 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms