Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM50Q86XT4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM50Q86XT4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC087481.3-201ENST00000602886 1894 ntBASIC16.89■□□□□ 0.29
TRIM50Q86XT4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC007950.2-201ENST00000615045 2347 ntBASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 MIR663B-201ENST00000408361 115 ntBASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 C18orf15-201ENST00000623680 2534 ntBASIC16.89■□□□□ 0.29
TRIM50Q86XT4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM50Q86XT4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.88■□□□□ 0.29
TRIM50Q86XT4 AC079178.1-201ENST00000420915 656 ntBASIC16.88■□□□□ 0.29
TRIM50Q86XT4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.88■□□□□ 0.29
TRIM50Q86XT4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM50Q86XT4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms