Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC007952.4-201ENST00000573866 637 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AC133540.1-201ENST00000620845 1019 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL451007.2-201ENST00000632004 563 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL513523.2-202ENST00000427283 2040 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC004686.1-201ENST00000605113 538 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 LINC01783-202ENST00000614408 828 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 BX284668.2-205ENST00000619677 828 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC003102.2-201ENST00000589195 1469 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ACE-203ENST00000413513 2237 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ALG3P1-201ENST00000508806 1114 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC084752.1-201ENST00000509766 622 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MIR6816-201ENST00000620368 66 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AP001184.1-201ENST00000637936 376 ntBASIC10.29□□□□□ -0.76
CSMD3Q7Z407 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MYB-201ENST00000316528 3571 ntTSL 5 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MYB-241ENST00000616088 3573 ntTSL 5 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.29□□□□□ -0.76
CSMD3Q7Z407 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 AC006548.2-201ENST00000605217 529 ntBASIC10.28□□□□□ -0.76
CSMD3Q7Z407 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.28□□□□□ -0.76
CSMD3Q7Z407 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms