Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAPH1Q70E73 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RAPH1Q70E73 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAPH1Q70E73 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 AC012508.2-201ENST00000567613 1472 ntBASIC15.35■□□□□ 0.05
RAPH1Q70E73 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.35■□□□□ 0.05
RAPH1Q70E73 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 AC069262.1-201ENST00000539058 672 ntBASIC15.35■□□□□ 0.05
RAPH1Q70E73 AL512356.2-201ENST00000546955 174 ntBASIC15.35■□□□□ 0.05
RAPH1Q70E73 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAPH1Q70E73 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 KRT18P43-201ENST00000469825 1281 ntBASIC15.34■□□□□ 0.05
RAPH1Q70E73 RN7SL618P-201ENST00000477850 296 ntBASIC15.34■□□□□ 0.05
RAPH1Q70E73 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 LINC01115-203ENST00000606068 577 ntBASIC15.34■□□□□ 0.05
RAPH1Q70E73 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 AC140479.7-201ENST00000636301 2332 ntBASIC15.34■□□□□ 0.05
RAPH1Q70E73 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAPH1Q70E73 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.34■□□□□ 0.05
RAPH1Q70E73 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAPH1Q70E73 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAPH1Q70E73 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms