Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 C1QBPP1-201ENST00000400117 770 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 NUS1P3-201ENST00000423502 862 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AC026434.2-201ENST00000506094 1078 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SERBP1P5-201ENST00000510079 1181 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 GPALPP1-207ENST00000611650 899 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 GRK6P1-201ENST00000400595 1711 ntBASIC17.09■□□□□ 0.33
SHC4Q6S5L8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SHC4Q6S5L8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AL442647.2-201ENST00000429864 857 ntBASIC17.08■□□□□ 0.32
SHC4Q6S5L8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AP001582.1-201ENST00000525856 295 ntBASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AC092552.1-201ENST00000547243 906 ntBASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.08■□□□□ 0.32
SHC4Q6S5L8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TPT1P11-201ENST00000458482 498 ntBASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms