Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.38□□□□□ -0.27
C11orf88Q6PI97 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC105339.1-204ENST00000636249 355 ntBASIC13.38□□□□□ -0.27
C11orf88Q6PI97 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 WASH6P-202ENST00000359512 1437 ntBASIC13.37□□□□□ -0.27
C11orf88Q6PI97 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf88Q6PI97 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 HMGA1P7-201ENST00000406908 502 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC023141.5-201ENST00000458585 616 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC067863.1-201ENST00000494933 530 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms