Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 RPSAP31-201ENST00000416648 895 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AL355334.1-201ENST00000417713 215 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC103810.10-201ENST00000606504 343 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 MIR6720-201ENST00000611664 98 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 HLA-C-210ENST00000640219 976 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CICP11-201ENST00000434745 2827 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CICP13-201ENST00000422015 2789 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC006449.5-201ENST00000610658 2098 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC012508.2-201ENST00000567613 1472 ntBASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 REXO1L4P-201ENST00000605109 1937 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AL138725.1-201ENST00000407347 1314 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC078991.1-201ENST00000437297 610 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC114501.1-201ENST00000445949 172 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 RN7SL258P-201ENST00000478664 300 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC135983.4-201ENST00000564116 1262 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 AC092171.5-201ENST00000608012 942 ntBASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms