Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.34□□□□□ -0.11
PDZK1Q5T2W1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PDZK1Q5T2W1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDZK1Q5T2W1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.33□□□□□ -0.11
PDZK1Q5T2W1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PDZK1Q5T2W1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.33□□□□□ -0.11
PDZK1Q5T2W1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AL512638.1-201ENST00000457493 794 ntBASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AC004890.2-204ENST00000481968 304 ntBASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AC093214.1-201ENST00000511688 1107 ntBASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AC008738.7-201ENST00000609744 511 ntBASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 AC022144.1-201ENST00000602255 1580 ntBASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.33□□□□□ -0.12
PDZK1Q5T2W1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 LINC00552-201ENST00000625151 2579 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC138969.3-201ENST00000546612 1459 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC138932.2-201ENST00000548268 1459 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC126755.4-201ENST00000549796 1459 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC135586.1-201ENST00000539323 574 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 AC005498.2-205ENST00000593218 784 ntBASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDZK1Q5T2W1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDZK1Q5T2W1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms