Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 KRT43P-201ENST00000434019 910 ntBASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AL355994.2-201ENST00000447882 704 ntBASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC120045.2-201ENST00000567334 178 ntBASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 AC093813.1-201ENST00000605066 256 ntBASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AL442647.2-201ENST00000429864 857 ntBASIC17■□□□□ 0.31
HERC4Q5GLZ8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ACE3P-201ENST00000423435 1973 ntBASIC17■□□□□ 0.31
HERC4Q5GLZ8 MYO15B-237ENST00000642007 4893 ntBASIC17■□□□□ 0.31
HERC4Q5GLZ8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC4Q5GLZ8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HERC4Q5GLZ8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.99■□□□□ 0.31
HERC4Q5GLZ8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms